BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A05LP1|AL429833
(771 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1561 1193 0.0
>3x_Contig1561
Length = 10959
Score = 1193 bits (599), Expect = 0.0
Identities = 742/771 (96%), Gaps = 20/771 (2%)
Strand = Plus / Minus
Query: 1 cccaagatctctcaagcagcttcattgtatatgaggatgccttgtctttcaaacaggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4029 cccaagatctctcaagcagcttcattgtatatgaggatgccttgtctttcaaacaggcac 3970
Query: 61 atgtccgggtgacattacttgtgaggctaaatatatactccatatattattacatgtaaa 120
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 3969 atgtccgggtgacattacttgtgaggctaaaaata--ctccatatattattacatgtaaa 3912
Query: 121 acagtgtggtattccacctcgttttagtatagaatataatataataatatgaaaaaacat 180
||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 3911 acagtgtgga--tccacctcgttttag-atagaatataata-aataatatgaaaaaacat 3856
Query: 181 gctaattagtgacaattttttaatattctacttgcaatagatcttgttgatactgacgta 240
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct: 3855 gctaattagtgacaattttttaatattctacttgcaataga-cttgttga-actgacgaa 3798
Query: 241 tacgatatcgttcaacataatgtttcgttgagctatggacggacttttcatacttcttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3797 --cgatatcgttcaacataatgtttcgttgagctatggacggacttttcatacttcttga 3740
Query: 301 ctttggcgtccaatctaactgacttgttccgaatttgactttttgcaagttgagggtaac 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3739 ctttggcgtccaatctaactgacttgttccgaatttgactttttgcaagtggagggtaac 3680
Query: 361 agaaaagtattttttttagaaactgctaaaagtggaaatagctgattttataaaatgaat 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3679 agaaaag-attttttttagaaactgctaaaagtggaaatagctgattttataaaatgaat 3621
Query: 421 ttttgaagaagttgaatttagaaggaagaaaagatcaatttaaggagtnaagccaaattt 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3620 ttttgaagaagttgaatttagaaggaagaaaagatcaatttaaggagtaaagccaaattt 3561
Query: 481 gtatcccccaaaacagaacggaccaacagcttcaaagtcctgcwaagctatcaattatag 540
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3560 g-atcccccaaaacagaacggaccaacagcttcaaagtcctgcaaagctatcaattatag 3502
Query: 541 tttatagagggttattttctctctgcgagtgtgtttttttctgttttcttaggattatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3501 tttatagagggttattttctctctgcgagtgtgtttttttctgttttcttaggattatct 3442
Query: 601 atcttccgttttactncgggcttgaatatttcttttctagttcccytcyttttttttkgg 660
||||| ||||||||| |||||||||||||||| |||||||||||| || |||||||| ||
Sbjct: 3441 atctt-cgttttact-cgggcttgaatatttc-tttctagttcccttc-tttttttttgg 3386
Query: 661 agttttggcaataccgtgtggatacaaggttttccgaaagctttgttcatcagtgatatc 720
|||||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 3385 agtttt-gcaataccgtgt-gatacaaggtttt-cgaaagctttg-tcatcagtgatatc 3330
Query: 721 atttacttgtgctttcaccaaacattgtacgttttacaatttgmcttatcc 771
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3329 atttacttgtgctttcaccaaacattgtacgttttacaatttgacttatcc 3279
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7352
Number of Sequences: 1807
Number of extensions: 7352
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 771
length of database: 10,358,551
effective HSP length: 16
effective length of query: 755
effective length of database: 10,329,639
effective search space: 7798877445
effective search space used: 7798877445
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)